The detailed information of tRNA gene sequence


Sequence ID>SRA1002230
Genome IDSRR001308.318377
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 19
End posion on genome 94
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcctaaaaat
tRNA gene sequence 
GACCCCGTCGTCTAGTGGCCAAGGACGACAGGATTTCCTCCTGTAAACTCAAGTTCGAAT
CTTGATGGGGTCGCCA
Downstream region at tRNA end position 
tttactaaac
Secondary structure (Cloverleaf model)
>SRA1002230	Glu	TTC
                   t      GCCA tttactaaac
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     A G T T C     A
      T G A        C      | | | | |     G
    G       T C T G       T C A A G     C
    G       + | | |                 T T
    C       G G A C
      C A A        G     AAAC
                    A - T
                    C - G
                    A - T
                    G - C
                    G - C
                  A       T
                  T       C
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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