The detailed information of tRNA gene sequence


Sequence ID>SRA1002539
Genome IDSRR001326.9427
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 1
End posion on genome 86
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GAGGGGGTACCCGAGTCAGGTCTAAGGGGTGGGGTTCAGGTCCCCATGGCGAAGGCCTTC
GTGGGTTCAAATCCCACCCTCCGCACtc
Downstream region at tRNA end position 
tgaatggaaa
Secondary structure (Cloverleaf model)
>SRA1002539	Leu	CAG
                   n      ACtc tgaatggaaa
                     G - C
                     A   G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     A
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C T A        G     TGGCGAAGGCCTTC
                    T - A
                    G - C
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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