The detailed information of tRNA gene sequence


Sequence ID>SRA1002887
Genome IDSRR002326.78020
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 69
End posion on genome 144
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tatagcagct
tRNA gene sequence 
GGCCTGTTCTTCTAAGGGTTTAGGATATCAAGCTTTCTACTTGATGATGTGGGTTCGAAT
CCCATACAGGTTACCA
Downstream region at tRNA end position 
tggttcggtg
Secondary structure (Cloverleaf model)
>SRA1002887	Glu	TTC
                   t      ACCA tggttcggtg
                     G + T
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          T A
                    T     T A C C C     A
      G A A        C      + | | | |     G
    G       T C T T       G T G G G     C
    G       + | |                   T T
    T       G G A T
      T T A        A     TGAT
                    T - A
                    C - G
                    A - T
                    A - T
                    G - C
                  C       A
                  T       T
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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