The detailed information of tRNA gene sequence


Sequence ID>SRA1003138
Genome IDSRR002326.234438
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 233
End posion on genome 148
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtgtctcca
tRNA gene sequence 
GGAGGGCTGTCCGAGCGGCCGATGGAGCCAGTCTTGAAAACTGGTGGGCAGAAATGTCTC
TAGGGTTCGAATCCCTAGCCCTCCGCac
Downstream region at tRNA end position 
tgtactcagc
Secondary structure (Cloverleaf model)
>SRA1003138	Ser	TGA
                   a      GCac tgtactcagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     A T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       T A G G G     C
    G       + | | |                 T T
    C       T G G A
      C G A        G     TGGGCAGAAATGTCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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