The detailed information of tRNA gene sequence


Sequence ID>SRA1003246
Genome IDSRR002326.337531
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 211
End posion on genome 124
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caattcgttt
tRNA gene sequence 
GGAAGGGAGCCGGATACGGTTCGCCGGGGCGCACTGCTAACGCGCATGGCTTTCAAGCCA
ATGGGGGTTCGAATCCCTTCCCTTCCGCtg
Downstream region at tRNA end position 
cagtcaggcc
Secondary structure (Cloverleaf model)
>SRA1003246	Ser	GCT
                   t      GCtg cagtcaggcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    A     T T C C C     A
    C A T A        G      + + | | |     G
  G         G G C C       G G G G G     C
  G         | | | |                 T T
  T         C C G G
    T C G          G     ATGGCTTTCAAGCCAAT
                    G - C
                    C - G
                    G - C
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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