The detailed information of tRNA gene sequence


Sequence ID>SRA1003326
Genome IDSRR002326.392326
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 7
End posion on genome 77
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnatttag
tRNA gene sequence 
AAGTTAGTAGTTTAATGGTAAAATTTAGATCTCCAAAATCCTCGATGCAAGTTCAATTCT
TGCCTAACTTGttt
Downstream region at tRNA end position 
ttttcttttt
Secondary structure (Cloverleaf model)
>SRA1003326	Trp	CCA
                   g      Gttt ttttcttttt
                     A - T
                     A - T
                     G - C
                     T - A
                     T - A
                     A - T
                     G - C          T T
                    T     C G T T C     A
        A A        A      | | | | |     A
      T     T T T G       G C A A G     C
      G     | | | +                 T T
      G     A A A T
        T A        T     CGAT
                    T   T
                    A   C
                    G - C
                    A - T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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