The detailed information of tRNA gene sequence


Sequence ID>SRA1003679
Genome IDSRR002327.118350
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 4
End posion on genome 78
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
nnnnnnatcT
tRNA gene sequence 
GTTCCATTGGTCTAGTGGTTATGACATAACCTTAACACGGTTAGGGCCGCGTGTTCAATC
CACGCATGGAATATtt
Downstream region at tRNA end position 
tttaattttg
Secondary structure (Cloverleaf model)
>SRA1003679	Val	AAC
                   T      ATtt tttaattttg
                     G + T
                     T - A
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          C T
                    T     C G C A C     A
      T G A        G      | | | | |     A
    G       T C T G       G C G T G     C
    G         | | |                 T T
    T       T G A C
      T A          A     GGGCC
                    T - A
                    A - T
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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