The detailed information of tRNA gene sequence


Sequence ID>SRA1004013
Genome IDSRR002328.96127
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 273
End posion on genome 188
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAGAGCTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGAGGTGAAAGCCTCC
TGGGGTTCGAATCCCTAGCTCTCCGCtt
Downstream region at tRNA end position 
atatagataa
Secondary structure (Cloverleaf model)
>SRA1004013	Ser	TGA
                   c      GCtt atatagataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAGGTGAAAGCCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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