The detailed information of tRNA gene sequence


Sequence ID>SRA1004077
Genome IDSRR002328.135231
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 73
End posion on genome 158
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttgcaac
tRNA gene sequence 
GGAGANCTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGAGGTGAAAGCCTCC
TGGGGTTCGAATCCCTAGCTCTCCGCtt
Downstream region at tRNA end position 
atatagataa
Secondary structure (Cloverleaf model)
>SRA1004077	Ser	TGA
                   c      GCtt atatagataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     N   C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAGGTGAAAGCCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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