The detailed information of tRNA gene sequence


Sequence ID>SRA1004324
Genome IDSRR002328.276793
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 24
End posion on genome 97
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attcaatgat
tRNA gene sequence 
GGCGTCGTGGCCGAGTGGCTAGGCTGGGCTCTGCAAAAGCTCCTACTGCGGTTCGAATCC
GCACGATGCCTCAA
Downstream region at tRNA end position 
aaaacctctc
Secondary structure (Cloverleaf model)
>SRA1004324	Cys	GCA
                   t      TCAA aaaacctctc
                     G - C
                     G - C
                     C - G
                     G + T
                     T - A
                     C - G
                     G - C          T A
                    T     A C G C C     A
        G A        G      | | | | |     G
      T     G C C G       T G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        T     CTAC
                    G - C
                    G + T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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