The detailed information of tRNA gene sequence


Sequence ID>SRA1005051
Genome IDSRR006906.244202
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 141
End posion on genome 229
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatcaaaatt
tRNA gene sequence 
TGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTAT
CGGAGGGTTCGAATCCCTCCTCACCGCAAa
Downstream region at tRNA end position 
taaacnnnnn
Secondary structure (Cloverleaf model)
>SRA1005051	Ser	GGA
                   t      CAAa taaacnnnnn
                     T + G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    G     C T C C C     A
    T G A G        T      | | | | |     G
  G         C C T G       G A G G G     C
  G         | | |                   T T
  C         G G A G
    T G A A        C     ATACGGCAACGTATCG
                    A - T
                    C - G
                    G + T
                    C - G
                    C   T
                  T       G
                  G       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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