The detailed information of tRNA gene sequence


Sequence ID>SRA1005114
Genome IDSRR006907.38838
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 214
End posion on genome 139
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
agaacaacac
tRNA gene sequence 
GGGGCGTAAGGTAAGCCGGTTGCATCCGATACTCTTATAAGGTATTCATAGGTAGGTTCG
ACTCCTACACGCCCTAttt
Downstream region at tRNA end position 
ttaaactaca
Secondary structure (Cloverleaf model)
>SRA1005114	Ile	TAT
                   c      Attt ttaaactaca
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     C A T C C     A
    C C G A        A      | | | | |     G
  G         A T G G       G T A G G     C
  G             | |                 T T
  T         A T C C
    T G C          G     TCATAG
                    A - T
                    T - A
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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