The detailed information of tRNA gene sequence


Sequence ID>SRA1005227
Genome IDSRR006907.123529
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 2
End posion on genome 75
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GCCTCTAAAGCATTGTGGTGATGCAGGTGTTTTGTAAGCACCAGAGCTCAGTTCGATTCT
GGGTAGGGGCTCCG
Downstream region at tRNA end position 
cgagcatggt
Secondary structure (Cloverleaf model)
>SRA1005227	Thr	TGT
                   c      TCCG cgagcatggt
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     T - A
                     A - T          T T
                    A     G G G T C     A
        G T        A      | + | | |     G
      T     T A C G       C T C A G     C
      G     | | | |                 T T
      G     A T G C
        T G        A     AGAG
                    G - C
                    G - C
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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