The detailed information of tRNA gene sequence


Sequence ID>SRA1005269
Genome IDSRR006907.141142
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 198
End posion on genome 125
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcccccgctt
tRNA gene sequence 
GCTCCTTTAGCAATCTGGTGAATGCAGCGAACTCATAATTCGCCTGAGGCGTGTTCGATC
CACGCAAGGAGCACtt
Downstream region at tRNA end position 
gacagattac
Secondary structure (Cloverleaf model)
>SRA1005269	Met	CAT
                   t      ACtt gacagattac
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A
                     T - A          C T
                    T     C G C A C     A
      T C T        A      | | | | |     G
    G       A A C G       G C G T G     C
    G         | | |                 T T
    T       A T G C
      G A          A     CTGAG
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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