The detailed information of tRNA gene sequence


Sequence ID>SRA1005396
Genome IDSRR006907.244579
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 73
End posion on genome 146
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgacataaat
tRNA gene sequence 
TGTGACGTGTCCGAACGGTTTAGGGGCTATCCTGATACGGTAGTTTAAGTGGGTTCGATT
CCCACCGTCACAACtt
Downstream region at tRNA end position 
actccttcat
Secondary structure (Cloverleaf model)
>SRA1005396	Ile	GAT
                   t      ACtt actccttcat
                     T - A
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     C A C C C     A
      C A A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | +                 T T
    T       A G G G
      T T          G     TTTAA
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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