The detailed information of tRNA gene sequence


Sequence ID>SRA1005580
Genome IDSRR014584.207622
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 172
End posion on genome 257
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggttttttc
tRNA gene sequence 
GGAAGGTTGCCAGAGTGGTTTAATGGGGCGTTCTGCTAAGACGTTGAACAGAAATGTTCC
GAAAGTTCGAATCTTTCACCTTCCGCat
Downstream region at tRNA end position 
aacatgtttt
Secondary structure (Cloverleaf model)
>SRA1005580	Ser	GCT
                   c      GCat aacatgtttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C T T T C     A
      T G A        G      | | | | |     G
    G       G A C C       G A A A G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TGAACAGAAATGTTCC
                    G + T
                    C - G
                    G - C
                    T - A
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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