The detailed information of tRNA gene sequence


Sequence ID>SRA1005600
Genome IDSRR014584.228438
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 165
End posion on genome 236
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tataacatat
tRNA gene sequence 
TTTCCCTTCGTCTAGCGGCAGGATATGATGCTTTGAACATCAGGACGGTTGGTTCGAATC
CACCAGGGAAACtag
Downstream region at tRNA end position 
ttctttgaaa
Secondary structure (Cloverleaf model)
>SRA1005600	Gln	TTG
                   t      Ctag ttctttgaaa
                     T - A
                     T - A
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C C A C C     A
        G A        C      |   | | |     G
      C     T C T G       G T T G G     C
      G     + | | +                 T T
      G     G G A T
        C A        A     GGACG
                    T - A
                    G - C
                    A - T
                    T - A
                    G - C
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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