The detailed information of tRNA gene sequence


Sequence ID>SRA1005639
Genome IDSRR014586.42334
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 88
End posion on genome 174
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggttttttcg
tRNA gene sequence 
GTAAGGTTGCCAGAGTGGTTTAATGGGGCGTTCTGCTAAGACGTTAGAACAGAAATGTTC
CGAAAGTTCGAATCTTTCACCTTCCGCat
Downstream region at tRNA end position 
aacatgtttt
Secondary structure (Cloverleaf model)
>SRA1005639	Ser	GCT
                   g      GCat aacatgtttt
                     G - C
                     T   C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C T T T C     A
      T G A        G      | | | | |     G
    G       G A C C       G A A A G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TAGAACAGAAATGTTCC
                    G + T
                    C - G
                    G - C
                    T - A
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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