The detailed information of tRNA gene sequence


Sequence ID>SRA1005648
Genome IDSRR014586.62333
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 21
End posion on genome 107
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ttcttctcta
tRNA gene sequence 
GCGGGGGTCAACGCCTGGTTGGCGTAGTAGAGCTTATACCTCTATGCAGCATCGCGTCTG
AGGGTTCGATCCCCTACCCCCGTACCA
Downstream region at tRNA end position 
attcccacca
Secondary structure (Cloverleaf model)
>SRA1005648	Ile	TAT
                   a      ACCA attcccacca
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          C T
                    T     A T C C C     A
      T C C        C        | | | |     G
    G       G C A A       G A G G G     C
    G       | | |                   T T
    T       C G T A
      T G G        G     TGCAGCATCGCGTCT
                    T - A
                    A - T
                    G - C
                    A - T
                    G - C
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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