The detailed information of tRNA gene sequence


Sequence ID>SRA1005738
Genome IDSRR014586.221462
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 127
End posion on genome 37
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagaagcacG
tRNA gene sequence 
GAAGGTCAAGCCGATCGGTGACGGCAGCGCTCTTGAAAAGCGTCGAGGCTGGATAAGCCC
TTGCGGGTTCGACCCCCGCACCTTCCGCC
Downstream region at tRNA end position 
Gtttggtcac
Secondary structure (Cloverleaf model)
>SRA1005738	Ser	TGA
                   G      CGCC Gtttggtcac
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A
                     C   C          C A
                    A     G C C C C     G
      C T A        A      + |   | |     C
    G       G C C G       T G C G G     T
    G       | | | |                 G T
    T       C G G C
      G A          A     CGAGGCTGGATAAGCCCT
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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