The detailed information of tRNA gene sequence


Sequence ID>SRA1005849
Genome IDSRR014588.52929
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 23
End posion on genome 113
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgcagataa
tRNA gene sequence 
GGAAACTTACTCAAATGGTTAAGAGGAGTGTTTGCTAAACACTTAGAACATCTAAACAAT
GTTGTAAAGGTTCGAATCCTTTAGTTTCCGCag
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005849	Ser	GCT
                   a      GCag gnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     T - A          T A
                    T     T T T C C     A
      T A A        A      | | | | |     G
    G       A C T C       A A A G G     C
    G         | | |                 T T
    T       A G A G
      T A          G     TAGAACATCTAAACAATGTTGT
                    A - T
                    G - C
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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