The detailed information of tRNA gene sequence


Sequence ID>SRA1005905
Genome IDSRR014589.35126
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 118
End posion on genome 191
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctacaattt
tRNA gene sequence 
GGTACTGTGTCCGACTGGCAAGGTGGAGCTCTGCAAAAGCTCTTATATTGGTTCAATTCC
AATCGGTACCTCTA
Downstream region at tRNA end position 
aaataatgta
Secondary structure (Cloverleaf model)
>SRA1005905	Cys	GCA
                   t      TCTA aaataatgta
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     T + G
                     G - C          T T
                    T     T A A C C     A
        C A        G      | | | | |     A
      T     G C C T       A T T G G     C
      G       | |                   T T
      G     A G G T
        C A        G     TTAT
                    G - C
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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