The detailed information of tRNA gene sequence


Sequence ID>SRA1006214
Genome IDSRR016610.298843
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 104
End posion on genome 19
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttccgttaat
tRNA gene sequence 
GTGTAGGCTGGGCAATGGTGAGCCCCCCTTGATTGTAGATCAGACGCCGCACGGCTGTAA
TGGTTCGACTCCATTCCTACACACCA
Downstream region at tRNA end position 
attaaactta
Secondary structure (Cloverleaf model)
>SRA1006214	Tyr	GTA
                   t      ACCA attaaactta
                     G - C
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C          T C
                    C     T T A C C     A
      T A A        T      | | | | |     G
    G       C G G G       A A T G G     C
    G         | | |                 T T
    T       C C C C
      G A G        C     CGCCGCACGGCTGT
                    C   A
                    T + G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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