The detailed information of tRNA gene sequence


Sequence ID>SRA1007159
Genome IDSRR020488.358701
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 206
End posion on genome 280
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttttttaaaT
tRNA gene sequence 
GGATCTCTGGTGTAACGGGTGTGCACAGGCGCCTGAAAAGCGCTAGGATGGAGTTCGAGT
CTCCGGGGATCCATnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1007159	Phe	GAA
                   T      ATnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     T + G
                     C - G          T G
                    T     G C C T C     A
      C A A        G      + | | | |     G
    G       T G T G       T G G A G     C
    G       + | | |                 T T
    G       G C A C
      T G T        A     AGGA
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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