The detailed information of tRNA gene sequence


Sequence ID>SRA1007414
Genome IDSRR020488.440915
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 105
End posion on genome 27
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
actagttagc
tRNA gene sequence 
TCTGCGGTGGCGAAAATGGTAAACGCATTCTGTTGTTTGCAGTCATAATCTGAAGGTTCG
ACTCCTTCCCGCAGAGCTA
Downstream region at tRNA end position 
actagtacaa
Secondary structure (Cloverleaf model)
>SRA1007414	Ala	TGC
                   c      GCTA actagtacaa
                     T - A
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    T     C T T C C     A
      A A A        G      | | | | |     G
    T       A G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A A        A     ATAATCT
                    T   C
                    T   T
                    C - G
                    T - A
                    G - C
                  T       G
                  T       T
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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