The detailed information of tRNA gene sequence


Sequence ID>SRA1007869
Genome IDSRR020490.100340
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 48
End posion on genome 121
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcttattT
tRNA gene sequence 
GGCCCATTAGTATAATGGTTAGTACTAGTGCCTGTCTAGCACAAGGACGCAGTTCAATTC
TGCGATGGGTCGTta
Downstream region at tRNA end position 
gagatattat
Secondary structure (Cloverleaf model)
>SRA1007869	Asp	GTC
                   T      GTta gagatattat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     G C G T C     A
      T A A        A      | | | | |     A
    G       T A T G       C G C A G     C
    G       + | | |                 T T
    T       G T A C
      T A          T     AGGA
                    A   A
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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