The detailed information of tRNA gene sequence


Sequence ID>SRA1011250
Genome IDSRR020492.341861
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 149
End posion on genome 61
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcggttcccc
tRNA gene sequence 
GGAGGGATGCGAGAGCGGACGAATCGGCACGCTTGGAAAGCGTGTGTGGCCCTTGGTCAC
CGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position 
tgcggtggcc
Secondary structure (Cloverleaf model)
>SRA1011250	Ser	GGA
                   c      GCCG tgcggtggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    A       A T C G
      C G A        G     TGTGGCCCTTGGTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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