The detailed information of tRNA gene sequence


Sequence ID>SRA1014959
Genome IDSRR023845.398750
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 210
End posion on genome 115
Amino Acid Stop
Anticodon CTA
Upstream region at tRNA start position 
ctcggcggtG
tRNA gene sequence 
GAGGCGTCAGGGTGTCTGGTGACCCCCGCGGCCTCTAAAGCCGACGTGGCCCGGTACCCG
GGTCAGGCGGGTTCGATTCCCGTCCGCCTCCGCC
Downstream region at tRNA end position 
Acagcccact
Secondary structure (Cloverleaf model)
>SRA1014959	Stop	CTA
                   G      CGCC Acagcccact
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C T G        A      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       C C C C
      T G A        C     CGTGGCCCGGTACCCGGGTCAG
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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