The detailed information of tRNA gene sequence


Sequence ID>SRA1015125
Genome IDSRR023845.468603
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 75
End posion on genome 147
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgggtaagta
tRNA gene sequence 
AAGGCTATAGCTTAATTGGTAAAGCAAGCTGCTCATGATAGCTCAGATGAGTGTTCGAAT
CATTCTAGCCTTAaat
Downstream region at tRNA end position 
cgactttctt
Secondary structure (Cloverleaf model)
>SRA1015125	Met	CAT
                   a      Aaat cgactttctt
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C T T A C     A
      T A A        A      | | + | |     G
    T       T T C G       G A G T G     C
    G       | | | |                 T T
    G       A A G C
      T A          A     CAGAT
                    A - T
                    G - C
                    C - G
                    T - A
                    G + T
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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