The detailed information of tRNA gene sequence


Sequence ID>SRA1016341
Genome IDSRR023846.458989
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 39
End posion on genome 112
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tataatgtaa
tRNA gene sequence 
CGAGATATAGTGTAATTTGGTAACATATTCTGTTTTGGGTACAGCTGATTTCAGTTCAAA
TCTGAATATCTCGAatt
Downstream region at tRNA end position 
caatttatta
Secondary structure (Cloverleaf model)
>SRA1016341	Pro	TGG
                   a      Aatt caatttatta
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     A A G T C     A
      T A A        A      | | | | |     A
    T       T G T G       T T C A G     C
    T       | | | +                 T T
    G       A C A T
      G T A        A     CTGAT
                    T + G
                    T - A
                    C   C
                    T - A
                    G + T
                  T       G
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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