The detailed information of tRNA gene sequence


Sequence ID>SRA1016919
Genome IDSRR035082.53419
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 285
End posion on genome 200
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctccgtttgt
tRNA gene sequence 
GAGTCTGTGATGGAACTGGTATACATGACAATCTGTGAAATTGTTGCTCTCACCGAGATT
GGGGGTTCAAATCCCCTCAGACTCACtt
Downstream region at tRNA end position 
tttattcaac
Secondary structure (Cloverleaf model)
>SRA1016919	His	GTG
                   t      ACtt tttattcaac
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      C A A        G      + | | | |     A
    T       G G T A       G G G G G     C
    G         | | |                 T T
    G       A C A T
      T A T        G     TGCTCTCACCGAGATT
                    A - T
                    C - G
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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