The detailed information of tRNA gene sequence


Sequence ID>W2012432593
Genome IDWSXR01000027
Search identical group
Phylum/ClassAquificota
SpeciesDesulfurobacterium thermolithotrophum HR11 [WSXR]
Start position on genome 5034
End posion on genome 5128
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tattcaaatt
tRNA gene sequence 
GGAGGCGGACGGAGGCTGGTGTCTCCCCCGGACTTCAAATCCGGTGGCCCCATCAAGGAT
GGGGTGGTAGGTTCGATTCCTATCCGCCTCCGCCA
Downstream region at tRNA end position 
aaataaacta
Secondary structure (Cloverleaf model)
>W2012432593	SeC	TCA
                   t      GCCA aaataaacta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    A     T A T C C     A
      T C G        C      + | | | |     G
    G       G A G G       G T A G G     C
    G       | | | |                 T T
    T       C T C C
      G T          C     TGGCCCCATCAAGGATGGGGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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