The detailed information of tRNA gene sequence


Sequence ID>SRA1017070
Genome IDSRR035082.75276
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 279
End posion on genome 193
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatcgaacaa
tRNA gene sequence 
GTGTACGTGGTGTGAGTGGTTTAAGCCGACAGTTTGCAAAGCTGTTTTTCGAAAGAAAGT
CGTCAGTTCGAATCTGACCGTACACTCag
Downstream region at tRNA end position 
caactttata
Secondary structure (Cloverleaf model)
>SRA1017070	Cys	GCA
                   a      TCag caactttata
                     G - C
                     T - A
                     G - C
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     C A G T C     A
    T G A G        G      | | | | |     G
  G         T G T G       G T C A G     C
  G         |     |                 T T
  T         A G C C
    T T A          G     TTTTCGAAAGAAAGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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