The detailed information of tRNA gene sequence


Sequence ID>W2012435472
Genome IDWTPX01000005
Search identical group
Phylum/ClassPlanctomycetota
SpeciesAlienimonas chondri LzC2 [WTPX]
Start position on genome 32587
End posion on genome 32674
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcggcagacc
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGTCGATCGGGCAGGATTGCTAATCCTGTGTACCTTTCGGGGTA
CCGCGGGTTCGAATCCCGCACTCTCCGCtt
Downstream region at tRNA end position 
gaggttgtcg
Secondary structure (Cloverleaf model)
>W2012435472	Ser	GCT
                   c      GCtt gaggttgtcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTACCTTTCGGGGTACC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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