The detailed information of tRNA gene sequence


Sequence ID>W2012435480
Genome IDWTPX01000024
Search identical group
Phylum/ClassPlanctomycetota
SpeciesAlienimonas chondri LzC2 [WTPX]
Start position on genome 40782
End posion on genome 40855
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cacccaatga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCAGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGCAGGTTCGAA
TCCTGTCCCCGCCAtca
Downstream region at tRNA end position 
atcgaagacg
Secondary structure (Cloverleaf model)
>W2012435480	fMet	CAT
                   a      Atca atcgaagacg
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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