The detailed information of tRNA gene sequence


Sequence ID>SRA1029000
Genome IDSRR035087.57288
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 321
End posion on genome 248
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttatataa
tRNA gene sequence 
TGTGGAGTGGTGTAATGGTTTTTGCACAAGAGCCTCATGAGTTCTAGGGCATGGTTCAAT
TCCATGCTCCACAAtta
Downstream region at tRNA end position 
tttttcttaa
Secondary structure (Cloverleaf model)
>SRA1029000	Met	CAT
                   a      Atta tttttcttaa
                     T - A
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     G T A C C     A
    G T A A        G      | | | | |     A
  G         T G T G       C A T G G     C
  T         + | | |                 T T
  T         G C A C
    T T T          A     AGGG
                    A - T
                    G - C
                    A - T
                    G + T
                    C - G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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