The detailed information of tRNA gene sequence


Sequence ID>SRA1029390
Genome IDSRR035087.120522
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 102
End posion on genome 15
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtttactttt
tRNA gene sequence 
AGGAGTATAGCCTCAATGGCAAGGCACCGGTCTCCAAAACCGAGGTTGGAAAGTTTCCAT
GCGTGTTCGAATCGCGCTACTCCTGCTA
Downstream region at tRNA end position 
aatgggtctt
Secondary structure (Cloverleaf model)
>SRA1029390	Trp	CCA
                   t      GCTA aatgggtctt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     C G C G C     A
      A A C        A      | | | + |     G
    T       T C C G       G C G T G     C
    G       | | | |                 T T
    G       A G G C
      C A          A     GGTTGGAAAGTTTCCAT
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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