The detailed information of tRNA gene sequence


Sequence ID>SRA1031224
Genome IDSRR035087.395026
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 401
End posion on genome 490
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caggcgcacc
tRNA gene sequence 
AGGAGGGGTGCAGGAGTGGTTTATCTGGCAGGGTTTCGAAAACCTTGCGGGCTTTTAGCT
CACGGGAGTTCAAATCTCCCCCCTCCGCCAa
Downstream region at tRNA end position 
tcataaagct
Secondary structure (Cloverleaf model)
>SRA1031224	Ser	CGA
                   c      CCAa tcataaagct
                     A   G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    G     C C C T C     A
    T G A G        T      | | | | |     A
  G         G A C G       G G G A G     C
  G         | | |                   T T
  T         C T G G
    T T A T        C     GCGGGCTTTTAGCTCAC
                    A - T
                    G + T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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