The detailed information of tRNA gene sequence


Sequence ID>SRA1031456
Genome IDSRR035087.432936
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 350
End posion on genome 262
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctgcgctt
tRNA gene sequence 
GGTGAGATGACAGAACCAGGTATTGTGCTCCGCTTGAGACGGAGAGACTCGCAAGAGTTA
TGTAGGTTCAAATCCTGCTCTCACCGCTA
Downstream region at tRNA end position 
aaaaagggct
Secondary structure (Cloverleaf model)
>SRA1031456	Ser	TGA
                   t      GCTA aaaaagggct
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G T C C     A
      C A A        G      | + | | |     A
    C       G A C A       G T A G G     C
    A       + | | |                 T T
    G       T T G T
      G T A        G     AGACTCGCAAGAGTTAT
                    C - G
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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