The detailed information of tRNA gene sequence


Sequence ID>SRA1040716
Genome IDSRR035091.135989
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 345
End posion on genome 430
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttatcttaaT
tRNA gene sequence 
GTCACGGTGGCACAATCTGGTACTGCGCGGGCCTTGAAAGCCCGTTTCCTCCGGGATATC
CCAGTTCAAATCTGGGCCGTGGCGTtt
Downstream region at tRNA end position 
ttctttatgt
Secondary structure (Cloverleaf model)
>SRA1040716	Ser	TGA
                   T      GTtt ttctttatgt
                     G - C
                     T + G
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     G G G T C     A
      T A A        G      | | | | |     A
    C       C A C G       C C C A G     C
    T         | | |                 T T
    G       C T G C
      G T A        G     TTTCCTCCGGGATAT
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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