The detailed information of tRNA gene sequence


Sequence ID>SRA1043711
Genome IDSRR035092.163927
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 149
End posion on genome 233
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctcctacat
tRNA gene sequence 
GGAGAGTTGCTAGAACGGTAATAGGCTCGCTTGCTAAGCGAAGTCGGTGTAACAGCCAAG
AAGGTTCGACTCCTTTGCTCTCCGCat
Downstream region at tRNA end position 
tagatataca
Secondary structure (Cloverleaf model)
>SRA1043711	Ser	GCT
                   t      GCat tagatataca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T C
                    T     T T T C C     A
        A A        G      + | | | |     G
      C     G A T C       G A A G G     C
      G       | | |                 T T
      G     A T A G
        T A        G     GTCGGTGTAACAGCCAA
                    C   A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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