The detailed information of tRNA gene sequence


Sequence ID>SRA1044153
Genome IDSRR035092.231814
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 290
End posion on genome 379
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctcatttat
tRNA gene sequence 
GGATAGGCATTAGATTGGTGACTTAAGCTCCCTGCTAAGGAGTCGTTCCTGTTAAAGGGC
TTGGAGGTTCGAATCCTCTTCTATCCGCTA
Downstream region at tRNA end position 
agatattaag
Secondary structure (Cloverleaf model)
>SRA1044153	Ser	GCT
                   t      GCTA agatattaag
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     G + T          T A
                    C     T C T C C     A
      T T A        A      + | | | |     G
    G       G A T T       G G A G G     C
    G       | |   |                 T T
    T       C T T A
      G A          A     CGTTCCTGTTAAAGGGCTT
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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