The detailed information of tRNA gene sequence


Sequence ID>SRA1044161
Genome IDSRR035092.234269
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 490
End posion on genome 406
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
GTGTCTGTGAGCTAGTGGACGAGGCTAGTAGATTGTGGTTCTACACGTAAGATACATCGT
CAGTTCGAATCTGACCAGACACCCAc
Downstream region at tRNA end position 
gtaacttttt
Secondary structure (Cloverleaf model)
>SRA1044161	His	GTG
                   g      CCAc gtaacttttt
                     G - C
                     T - A
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A G T C     A
      T G A        G      | | | | |     G
    G       T C G A       G T C A G     C
    G       + | | |                 T T
    A       G G C T
      C G A        A     ACGTAAGATACATC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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