The detailed information of tRNA gene sequence


Sequence ID>SRA1044521
Genome IDSRR035092.293108
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 223
End posion on genome 130
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tacctacaaT
tRNA gene sequence 
AGCCCCGTAGTGTAGAGGCCAAGCATGTCGGGTTCTGGGATTGAAAACAATGGAAATACC
CGTTGACGAGAGTTCGAATCTCTCCGGGGCTATtc
Downstream region at tRNA end position 
ttctttttcc
Secondary structure (Cloverleaf model)
>SRA1044521	Gln	CTG
                   T      ATtc ttctttttcc
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C T C     A
      A G A        A      | | | | |     G
    G       T G T G       G A G A G     C
    G       + | | +                 T T
    C       G C A T
      C A A        G     AAACAATGGAAATACCCGTTGAC
                    T - A
                    C - G
                    G + T
                    G + T
                    G   A
                  T       G
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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