The detailed information of tRNA gene sequence


Sequence ID>SRA1044926
Genome IDSRR035092.374336
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 186
End posion on genome 261
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaaagcttt
tRNA gene sequence 
GGGTCGCTAATATAAATGGCAAATATAATCGGCTCCAACCCGATTAATGTGAGTTCGAAT
CTTACGCGGCCTGCCA
Downstream region at tRNA end position 
attaacaaca
Secondary structure (Cloverleaf model)
>SRA1044926	Trp	CCA
                   t      GCCA attaacaaca
                     G + T
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     C - G          T A
                    T     C A T T C     A
      A A A        A      | | + | |     G
    T       T A T A       G T G A G     C
    G       | | | |                 T T
    G       A T A T
      C A A        A     TAAT
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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