The detailed information of tRNA gene sequence


Sequence ID>SRA1048219
Genome IDSRR035094.130082
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 243
End posion on genome 316
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cacactataa
tRNA gene sequence 
GCACGGGTAGTTCAAATGGCAAAGATGCGGGACTGCAAATCCTGAGGTGTGGGTTCGAAT
CCCACTCGGTGCTCat
Downstream region at tRNA end position 
aatgcgttgt
Secondary structure (Cloverleaf model)
>SRA1048219	Cys	GCA
                   a      TCat aatgcgttgt
                     G - C
                     C - G
                     A - T
                     C - G
                     G   G
                     G - C
                     G + T          T A
                    T     C A C C C     A
      A A A        A      | | | | |     G
    T       C T T G       G T G G G     C
    G         + | +                 T T
    G       A G A T
      C A A        G     AGGT
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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