The detailed information of tRNA gene sequence


Sequence ID>SRA1048467
Genome IDSRR035094.180543
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 243
End posion on genome 317
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cataatttaT
tRNA gene sequence 
TGCGGGTGGATGGTGTGGTCATCATACTTGTCTCATAAGCAAGCAAAAGTTGGTTCGATT
CCAACACCCGCAATta
Downstream region at tRNA end position 
ctatttatat
Secondary structure (Cloverleaf model)
>SRA1048467	Met	CAT
                   T      ATta ctatttatat
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    G     C A A C C     A
      T G T        G      | | | | |     G
    G       G G T A       G T T G G     C
    G       + | | |                 T T
    T       T C A T
      C A          A     CAAAA
                    C - G
                    T - A
                    T - A
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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