The detailed information of tRNA gene sequence


Sequence ID>SRA1050939
Genome IDSRR035096.55360
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 120
End posion on genome 34
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagtctttgt
tRNA gene sequence 
GGAAGAGTAGGAAAATTGGTTATCCCCTTTCCGCTCATAACGGAACGCTTAACAGCACTG
TCGGTTCAAGTCCGACCTCTTCCACAA
Downstream region at tRNA end position 
agacttctac
Secondary structure (Cloverleaf model)
>SRA1050939	Met	CAT
                   t      ACAA agacttctac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C A G C C     A
    T T A A        A      | | | | |     A
  G         A A G G       G T C G G     C
  G             | |                 T T
  T         C C C C
    T A T          T     CGCTTAACAGCACT
                    T - A
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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