The detailed information of tRNA gene sequence


Sequence ID>SRA1005871
Genome IDSRR014588.185670
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 38
End posion on genome 114
Amino Acid Stop
Anticodon TTA
Upstream region at tRNA start position 
cagtataaac
tRNA gene sequence 
GCTTCGGTAGCCAAAACGGTGAAGGCATTCGTCTTTATAAAGCGAACGATGTGCGGGTTC
GATTCCCGCCCGAAGCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005871	Stop	TTA
                   c      Annn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     G - C
                     G - C          T T
                    T     C G C C C     A
      A A A        A      | | | | |     G
    C       A C C G       G C G G G     C
    G         | | |                 T T
    G       A G G C
      T G A        A     AACGATGT
                    T + G
                    T   C
                    C - G
                    G   A
                    T - A
                  C       A
                  T       T
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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