The detailed information of tRNA gene sequence


Sequence ID>ENV09000018
Genome IDABSN01000624
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 693
End posion on genome 783
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggatcacgtt
tRNA gene sequence 
GGAGGCGGAATGGGCCCGGTGGCCCTCCTGGTCTTCAAAACCAGCGAACCCGCTAATAAC
GGGTTAGTGGGTTCGACTCCCACACGCCTCCgcca
Downstream region at tRNA end position 
acgctttctt
Secondary structure (Cloverleaf model)
>ENV09000018	SeC	TCA
                   t      gcca acgctttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G   A          T C
                    A     C A C C C     A
      C C C        A      | | | | |     G
    G       G G G T       G T G G G     C
    G       | | |                   T T
    T       C C C T
      G G          C     CGAACCCGCTAATAACGGGTTA
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK